==> Building on X ==> Checking for remote environment... ==> Syncing package to remote host... sending incremental file list created directory packages/python-netcdf4 ./ PKGBUILD 1,553 100% 0.00kB/s 0:00:00 1,553 100% 0.00kB/s 0:00:00 (xfr#1, to-chk=1/3) python-netcdf4-1.6.2-1.log 353 100% 344.73kB/s 0:00:00 353 100% 344.73kB/s 0:00:00 (xfr#2, to-chk=0/3) sent 1,291 bytes received 103 bytes 2,788.00 bytes/sec total size is 1,741 speedup is 1.25 ==> Patching arch to riscv64... ==> Running extra-riscv64-build -- -d /home/felix/packages/riscv64-pkg-cache:/var/cache/pacman/pkg -l felix8 on remote host... [?25l:: Synchronizing package databases... core downloading... extra downloading... community downloading... :: Starting full system upgrade... there is nothing to do [?25h==> Building in chroot for [extra] (riscv64)... ==> Synchronizing chroot copy [/var/lib/archbuild/extra-riscv64/root] -> [felix8]...done ==> Making package: python-netcdf4 1.6.2-1 (Sat Nov 26 16:09:16 2022) ==> Retrieving sources...  -> Downloading netCDF4-1.6.2.tar.gz... % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 4 759k 4 38472 0 0 30255 0 0:00:25 0:00:01 0:00:24 30255 100 759k 100 759k 0 0 429k 0 0:00:01 0:00:01 --:--:-- 1454k  -> Downloading python-netcdf4-fix-netcdf-filters-detection.patch... % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 19335 0 19335 0 0 14208 0 --:--:-- 0:00:01 --:--:-- 14208 ==> Validating source files with sha256sums... netCDF4-1.6.2.tar.gz ... Passed python-netcdf4-fix-netcdf-filters-detection.patch ... Passed ==> Making package: python-netcdf4 1.6.2-1 (Sat Nov 26 16:09:39 2022) ==> Checking runtime dependencies... ==> Installing missing dependencies... [?25lresolving dependencies... looking for conflicting packages... Package (13) New Version Net Change Download Size extra/blas 3.11.0-1 0.21 MiB community/blosc 1.21.1-2 0.06 MiB 0.03 MiB extra/cblas 3.11.0-1 0.17 MiB community/hdf5 1.12.2-1 9.57 MiB 3.25 MiB extra/lapack 3.11.0-1 4.26 MiB community/libaec 1.0.6-1 0.09 MiB 0.03 MiB core/libnsl 2.0.0-2 0.06 MiB extra/libzip 1.9.2-1 0.38 MiB 0.23 MiB core/python 3.10.8-3 81.34 MiB extra/snappy 1.1.9-2 0.07 MiB community/netcdf 4.9.0-3 1.82 MiB 0.69 MiB community/python-cftime 1.6.1-1 0.34 MiB 0.16 MiB extra/python-numpy 1.23.5-1 29.80 MiB 5.17 MiB Total Download Size: 9.55 MiB Total Installed Size: 128.15 MiB :: Proceed with installation? [Y/n] :: Retrieving packages... python-numpy-1.23.5-1-riscv64 downloading... hdf5-1.12.2-1-riscv64 downloading... netcdf-4.9.0-3-riscv64 downloading... libzip-1.9.2-1-riscv64 downloading... python-cftime-1.6.1-1-riscv64 downloading... blosc-1.21.1-2-riscv64 downloading... libaec-1.0.6-1-riscv64 downloading... checking keyring... checking package integrity... loading package files... checking for file conflicts... :: Processing package changes... installing blas... installing cblas... installing lapack... installing libnsl... installing python... Optional dependencies for python python-setuptools python-pip sqlite [installed] mpdecimal: for decimal xz: for lzma [installed] tk: for tkinter installing python-numpy... Optional dependencies for python-numpy openblas: faster linear algebra installing python-cftime... installing libaec... installing hdf5... installing snappy... installing blosc... installing libzip... installing netcdf... Optional dependencies for netcdf netcdf-fortran: fortran bindings netcdf-cxx: c++ bindings [?25h==> Checking buildtime dependencies... ==> Installing missing dependencies... [?25lresolving dependencies... looking for conflicting packages... Package (17) New Version Net Change Download Size extra/python-appdirs 1.4.4-7 0.07 MiB community/python-autocommand 2.2.2-1 0.07 MiB community/python-inflect 6.0.2-1 0.28 MiB community/python-jaraco.context 4.2.0-1 0.03 MiB 0.01 MiB community/python-jaraco.functools 3.5.2-1 0.05 MiB community/python-jaraco.text 3.11.0-1 0.07 MiB community/python-more-itertools 9.0.0-1 0.49 MiB extra/python-ordered-set 4.1.0-1 0.06 MiB extra/python-packaging 21.3-1 0.26 MiB community/python-pydantic 1.10.2-1 5.79 MiB extra/python-pyparsing 3.0.9-1 0.96 MiB extra/python-tomli 2.0.1-1 0.08 MiB extra/python-trove-classifiers 2022.10.19-1 0.11 MiB community/python-typing_extensions 4.4.0-1 0.22 MiB extra/python-validate-pyproject 0.10.1-1 0.41 MiB community/cython 0.29.32-2 7.52 MiB extra/python-setuptools 1:65.6.1-1 3.31 MiB 0.58 MiB Total Download Size: 0.59 MiB Total Installed Size: 19.77 MiB :: Proceed with installation? [Y/n] :: Retrieving packages... python-setuptools-1:65.6.1-1-any downloading... python-jaraco.context-4.2.0-1-any downloading... checking keyring... checking package integrity... loading package files... checking for file conflicts... :: Processing package changes... installing cython... installing python-appdirs... installing python-more-itertools... installing python-jaraco.functools... installing python-jaraco.context... installing python-autocommand... installing python-typing_extensions... installing python-pydantic... Optional dependencies for python-pydantic python-dotenv: for .env file support python-email-validator: for email validation installing python-inflect... installing python-jaraco.text... installing python-ordered-set... installing python-pyparsing... Optional dependencies for python-pyparsing python-railroad-diagrams: for generating Railroad Diagrams python-jinja: for generating Railroad Diagrams installing python-packaging... installing python-tomli... installing python-trove-classifiers... installing python-validate-pyproject... installing python-setuptools... [?25h==> Retrieving sources...  -> Found netCDF4-1.6.2.tar.gz  -> Found python-netcdf4-fix-netcdf-filters-detection.patch ==> WARNING: Skipping all source file integrity checks. ==> Extracting sources...  -> Extracting netCDF4-1.6.2.tar.gz with bsdtar ==> Starting prepare()... patching file include/netCDF4.pxi Hunk #1 FAILED at 698. Hunk #2 FAILED at 723. 2 out of 2 hunks FAILED -- saving rejects to file include/netCDF4.pxi.rej patching file src/netCDF4/_netCDF4.pyx Hunk #1 succeeded at 1496 (offset 50 lines). patching file include/netCDF4.pxi Hunk #1 FAILED at 713. 1 out of 1 hunk FAILED -- saving rejects to file include/netCDF4.pxi.rej patching file src/netCDF4/_netCDF4.pyx Hunk #1 succeeded at 1496 (offset 50 lines). Hunk #2 FAILED at 3361. 1 out of 2 hunks FAILED -- saving rejects to file src/netCDF4/_netCDF4.pyx.rej patching file test/tst_compression_blosc.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_blosc.py.rej patching file test/tst_compression_bzip2.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_bzip2.py.rej patching file test/tst_compression_szip.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_szip.py.rej patching file test/tst_compression_zstd.py Hunk #1 FAILED at 49. 1 out of 1 hunk FAILED -- saving rejects to file test/tst_compression_zstd.py.rej can't find file to patch at input line 264 Perhaps you used the wrong -p or --strip option? The text leading up to this was: -------------------------- | |From 1010b05d389838acb7cda1ac7f708e4837b90d3c Mon Sep 17 00:00:00 2001 |From: jswhit |Date: Mon, 27 Jun 2022 12:28:10 -0600 |Subject: [PATCH 05/13] don't install plugins to see if tests are skipped | |--- | .github/workflows/build.yml | 2 +- | 1 file changed, 1 insertion(+), 1 deletion(-) | |diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml |index 11e21815..28e36a13 100644 |--- a/.github/workflows/build.yml |+++ b/.github/workflows/build.yml -------------------------- File to patch: Skip this patch? [y] Skipping patch. 1 out of 1 hunk ignored patching file test/tst_compression_blosc.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_blosc.py.rej patching file test/tst_compression_bzip2.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_bzip2.py.rej patching file test/tst_compression_szip.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_szip.py.rej patching file test/tst_compression_zstd.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_zstd.py.rej can't find file to patch at input line 352 Perhaps you used the wrong -p or --strip option? The text leading up to this was: -------------------------- | |From 4052bde62fc5f438fc446f585a543772f5abcc3e Mon Sep 17 00:00:00 2001 |From: jswhit |Date: Mon, 27 Jun 2022 16:08:36 -0600 |Subject: [PATCH 07/13] re-enable plugin install | |--- | .github/workflows/build.yml | 2 +- | 1 file changed, 1 insertion(+), 1 deletion(-) | |diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml |index 28e36a13..11e21815 100644 |--- a/.github/workflows/build.yml |+++ b/.github/workflows/build.yml -------------------------- File to patch: Skip this patch? [y] Skipping patch. 1 out of 1 hunk ignored can't find file to patch at input line 375 Perhaps you used the wrong -p or --strip option? The text leading up to this was: -------------------------- | |From 5c58e70f8467e2c0c3a3c8fe4cc206ac6529b66d Mon Sep 17 00:00:00 2001 |From: jswhit |Date: Mon, 27 Jun 2022 16:56:51 -0600 |Subject: [PATCH 08/13] update | |--- | .github/workflows/build_master.yml | 2 +- | 1 file changed, 1 insertion(+), 1 deletion(-) | |diff --git a/.github/workflows/build_master.yml b/.github/workflows/build_master.yml |index 00b3a52d..4b1490bd 100644 |--- a/.github/workflows/build_master.yml |+++ b/.github/workflows/build_master.yml -------------------------- File to patch: Skip this patch? [y] Skipping patch. 1 out of 1 hunk ignored can't find file to patch at input line 398 Perhaps you used the wrong -p or --strip option? The text leading up to this was: -------------------------- | |From 3d6785188b9cb84b071c9c8002a2cb38db7abd31 Mon Sep 17 00:00:00 2001 |From: Jeff Whitaker |Date: Mon, 27 Jun 2022 18:18:21 -0600 |Subject: [PATCH 09/13] update | |--- | .github/workflows/build_master.yml | 2 +- | 1 file changed, 1 insertion(+), 1 deletion(-) | |diff --git a/.github/workflows/build_master.yml b/.github/workflows/build_master.yml |index 4b1490bd..00b3a52d 100644 |--- a/.github/workflows/build_master.yml |+++ b/.github/workflows/build_master.yml -------------------------- File to patch: Skip this patch? [y] Skipping patch. 1 out of 1 hunk ignored patching file test/run_all.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 2 out of 2 hunks ignored -- saving rejects to file test/run_all.py.rej patching file test/tst_compression_zstd.py Reversed (or previously applied) patch detected! Assume -R? [n] Apply anyway? [n] Skipping patch. 1 out of 1 hunk ignored -- saving rejects to file test/tst_compression_zstd.py.rej can't find file to patch at input line 484 Perhaps you used the wrong -p or --strip option? The text leading up to this was: -------------------------- | |From 561c16bcc877cc3bd9759cd1ce06d9ad031b3c85 Mon Sep 17 00:00:00 2001 |From: Jeff Whitaker |Date: Mon, 27 Jun 2022 18:44:31 -0600 |Subject: [PATCH 11/13] test skipping plugin tests | |--- | .github/workflows/build_master.yml | 2 +- | 1 file changed, 1 insertion(+), 1 deletion(-) | |diff --git a/.github/workflows/build_master.yml b/.github/workflows/build_master.yml |index 00b3a52d..4b1490bd 100644 |--- a/.github/workflows/build_master.yml |+++ b/.github/workflows/build_master.yml -------------------------- File to patch: Skip this patch? [y] Skipping patch. 1 out of 1 hunk ignored patching file Changelog Hunk #1 FAILED at 1. 1 out of 1 hunk FAILED -- saving rejects to file Changelog.rej can't find file to patch at input line 530 Perhaps you used the wrong -p or --strip option? The text leading up to this was: -------------------------- | |From e117f851365f4465a6ab459d338ccb25c1deaddb Mon Sep 17 00:00:00 2001 |From: Jeff Whitaker |Date: Mon, 27 Jun 2022 18:53:19 -0600 |Subject: [PATCH 13/13] revert | |--- | .github/workflows/build_master.yml | 2 +- | 1 file changed, 1 insertion(+), 1 deletion(-) | |diff --git a/.github/workflows/build_master.yml b/.github/workflows/build_master.yml |index 4b1490bd..00b3a52d 100644 |--- a/.github/workflows/build_master.yml |+++ b/.github/workflows/build_master.yml -------------------------- File to patch: Skip this patch? [y] Skipping patch. 1 out of 1 hunk ignored ==> Starting build()... reading from setup.cfg... using nc-config... checking /usr/include ... HDF5 library version: 1.12.2 headers found in /usr/include using netcdf library version b'4.9.0' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has nc_create_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions netcdf lib does not have pnetcdf parallel functions netcdf lib has bit-grooming/quantization functions netcdf lib has zstandard compression functions netcdf lib has bzip2 compression functions netcdf lib has blosc compression functions netcdf lib has szip compression functions netcdf lib has nc_set_alignment function netcdf lib has nc_inq_filter_avail function NETCDF_PLUGIN_DIR not set, no netcdf compression plugins installed running build running build_py creating build creating build/lib.linux-riscv64-cpython-310 creating build/lib.linux-riscv64-cpython-310/netCDF4 copying src/netCDF4/__init__.py -> build/lib.linux-riscv64-cpython-310/netCDF4 copying src/netCDF4/utils.py -> build/lib.linux-riscv64-cpython-310/netCDF4 running build_ext cythoning src/netCDF4/_netCDF4.pyx to src/netCDF4/_netCDF4.c building 'netCDF4._netCDF4' extension creating build/temp.linux-riscv64-cpython-310 creating build/temp.linux-riscv64-cpython-310/src creating build/temp.linux-riscv64-cpython-310/src/netCDF4 gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -march=rv64gc -mabi=lp64d -O3 -pipe -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -g -ffile-prefix-map=/build/python/src=/usr/src/debug/python -flto=auto -ffat-lto-objects -march=rv64gc -mabi=lp64d -O3 -pipe -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -g -ffile-prefix-map=/build/python/src=/usr/src/debug/python -flto=auto -march=rv64gc -mabi=lp64d -O3 -pipe -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -g -ffile-prefix-map=/build/python/src=/usr/src/debug/python -flto=auto -march=rv64gc -mabi=lp64d -O2 -pipe -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -flto=auto -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include -I/usr/lib/python3.10/site-packages/numpy/core/include -Iinclude -I/usr/include/python3.10 -c src/netCDF4/_netCDF4.c -o build/temp.linux-riscv64-cpython-310/src/netCDF4/_netCDF4.o src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_7_MemBuf_4__dealloc__’: src/netCDF4/_netCDF4.c:4971:20: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 4971 | free(__pyx_v_self->memory); | ~~~~~~~~~~~~^~~~~~~~ In file included from /usr/include/python3.10/Python.h:34, from src/netCDF4/_netCDF4.c:6: /usr/include/stdlib.h:568:25: note: expected ‘void *’ but argument is of type ‘const void *’ 568 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__set_att’: src/netCDF4/_netCDF4.c:9587:106: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 9587 | __pyx_v_ierr = nc_put_att_string(__pyx_v_grpid, __pyx_v_varid, __pyx_v_attname, __pyx_v_N, __pyx_v_string_ptrs); | ^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:749: /usr/include/netcdf.h:1110:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1110 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c:10084:103: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 10084 | __pyx_v_ierr = nc_put_att_string(__pyx_v_grpid, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); | ~^~~~~~~~~~~~~~~~~~~ | | | char ** /usr/include/netcdf.h:1110:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1110 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_compound’: src/netCDF4/_netCDF4.c:69249:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 69249 | for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_enum’: src/netCDF4/_netCDF4.c:73259:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 73259 | for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_pymod_exec__netCDF4’: src/netCDF4/_netCDF4.c:93376:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 93376 | import_array(); | ^~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__get_types’: src/netCDF4/_netCDF4.c:10525:12: warning: ‘__pyx_v_typeids’ may be used uninitialized [-Wmaybe-uninitialized] 10525 | nc_type *__pyx_v_typeids; | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_8Variable___init__’: src/netCDF4/_netCDF4.c:37156:28: warning: ‘__pyx_v_dimids’ may be used uninitialized [-Wmaybe-uninitialized] 37156 | __pyx_v_ierr = nc_def_var(__pyx_v_self->_grpid, __pyx_v_varname, __pyx_v_xtype, __pyx_v_ndims, __pyx_v_dimids, (&__pyx_v_self->_varid)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:35439:8: note: ‘__pyx_v_dimids’ was declared here 35439 | int *__pyx_v_dimids; | ^~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_7Dataset_1__init__’: src/netCDF4/_netCDF4.c:658:40: warning: ‘__pyx_v_ierr’ may be used uninitialized [-Wmaybe-uninitialized] 658 | #define PyInt_FromLong PyLong_FromLong | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:14975:7: note: ‘__pyx_v_ierr’ was declared here 14975 | int __pyx_v_ierr; | ^~~~~~~~~~~~ gcc -shared -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -flto=auto -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -flto=auto -Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -flto=auto -march=rv64gc -mabi=lp64d -O2 -pipe -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -flto=auto build/temp.linux-riscv64-cpython-310/src/netCDF4/_netCDF4.o -L/usr/lib -L/usr/lib -Wl,--enable-new-dtags,-R/usr/lib -lnetcdf -o build/lib.linux-riscv64-cpython-310/netCDF4/_netCDF4.cpython-310-riscv64-linux-gnu.so ==> Starting check()... ........................................./build/python-netcdf4/src/netCDF4-1.6.2/test/tst_types.py:88: UserWarning: WARNING: missing_value not used since it cannot be safely cast to variable data type assert_array_equal(v3[:],-1*np.ones(n2dim,v3.dtype)) .................EE.EEEEEEEEE.....E.EEE.EEEEEEEEE....EEEEEE ====================================================================== ERROR: runTest (tst_cdf5.test_cdf5) testing NETCDF3_64BIT_DATA format (CDF-5) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_cdf5.py", line 20, in setUp v[:ndim] = arrdata File "src/netCDF4/_netCDF4.pyx", line 5519, in netCDF4._netCDF4.Variable.__setitem__ File "src/netCDF4/_netCDF4.pyx", line 5802, in netCDF4._netCDF4.Variable._put File "src/netCDF4/_netCDF4.pyx", line 2028, in netCDF4._netCDF4._ensure_nc_success RuntimeError: NetCDF: Operation not allowed in define mode ====================================================================== ERROR: runTest (tst_compression.CompressionTestCase) testing zlib and shuffle compression filters ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_compression.py", line 63, in setUp write_netcdf(self.files[0],False,None,array) File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_compression.py", line 18, in write_netcdf file = Dataset(filename,'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpyg7wzam5.nc' ====================================================================== ERROR: runTest (tst_compression_quant.CompressionTestCase) testing zlib and shuffle compression filters ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_compression_quant.py", line 33, in setUp write_netcdf(self.files[0],False,None,data_array) File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_compression_quant.py", line 17, in write_netcdf file = Dataset(filename,'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpd07jxo2w.nc' ====================================================================== ERROR: runTest (tst_shape.ShapeTestCase) test for issue 90 (array shape should not be modified by ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_shape.py", line 14, in setUp f = Dataset(file_name,'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmp06d4wt7w.nc' ====================================================================== ERROR: runTest (tst_scaled.GlobalSetAutoScaleTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_scaled.py", line 200, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmp7ewtzqco.nc' ====================================================================== ERROR: test_masked (tst_scaled.SetAutoScaleFalse) Testing auto-conversion of masked arrays for set_auto_mask(False) with masking ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_scaled.py", line 34, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmp87ae1bqt.nc' ====================================================================== ERROR: test_unmasked (tst_scaled.SetAutoScaleFalse) Testing (not) auto-scaling of variables for set_auto_scale(False) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_scaled.py", line 34, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpt6d45qnl.nc' ====================================================================== ERROR: test_masked (tst_scaled.SetAutoScaleTrue) Testing auto-scaling of variables for set_auto_scale(True) with masking ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_scaled.py", line 34, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmp_oqm3eu4.nc' ====================================================================== ERROR: test_unmasked (tst_scaled.SetAutoScaleTrue) Testing auto-scaling of variables for set_auto_scale(True) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_scaled.py", line 34, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmphqklhuhb.nc' ====================================================================== ERROR: test_auto_scale_write (tst_scaled.WriteAutoScaleTest) Testing automatic packing to all kinds of integer types ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_scaled.py", line 34, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmp8sal97uh.nc' ====================================================================== ERROR: runTest (tst_enum.EnumTestCase) testing enum data type ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_enum.py", line 25, in setUp f = Dataset(self.file,'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpvvfuevo0.nc' ====================================================================== ERROR: runTest (tst_refcount.RefCountTestCase) testing garbage collection (issue 218) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_refcount.py", line 8, in setUp nc = netCDF4.Dataset(file_name, mode='w', keepweakref=True, format='NETCDF4') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmp7aenu633.nc' ====================================================================== ERROR: runTest (tst_compound_alignment.CompoundAlignTestCase) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_compound_alignment.py", line 84, in setUp dataset = netCDF4.Dataset(self.file, "w") File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpyp7mk4sm.nc' ====================================================================== ERROR: runTest (tst_rename.VariablesTestCase) testing renaming of dimensions, variables and attribute deletion ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_rename.py", line 26, in setUp f = netCDF4.Dataset(self.file, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpksjn1ac7.nc' ====================================================================== ERROR: runTest (tst_grps.GroupsTestCase) testing groups ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_grps.py", line 41, in setUp f = netCDF4.Dataset(self.file1, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpt4iwie52.nc' ====================================================================== ERROR: runTest (tst_grps2.Groups2TestCase) testing implicit group and creation and Dataset.__getitem__ ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_grps2.py", line 17, in setUp f = netCDF4.Dataset(self.file,'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpn5kp7xpm.nc' ====================================================================== ERROR: runTest (tst_endian.EndianTestCase) testing endian conversion capability ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_endian.py", line 148, in setUp create_file(FILE_NAME,'NETCDF4_CLASSIC',data); self.file=FILE_NAME File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_endian.py", line 13, in create_file dataset = netCDF4.Dataset(file,'w',format=format) File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpj_pb1_6d.nc' ====================================================================== ERROR: test_scaled (tst_masked5.VectorMissingValues) Testing auto-conversion of masked arrays ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_masked5.py", line 23, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpws7idauf.nc' ====================================================================== ERROR: runTest (tst_unicodeatt.UnicodeAttTestCase) testing unicode attributes ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_unicodeatt.py", line 10, in setUp nc = Dataset(self.file,'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpwo7mw91q.nc' ====================================================================== ERROR: runTest (tst_unlimdim.UnlimdimTestCase) testing unlimited dimensions ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_unlimdim.py", line 24, in setUp f = netCDF4.Dataset(self.file, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmp7v9cnir5.nc' ====================================================================== ERROR: test_scaled (tst_masked4.SetValidMinMax) Testing auto-conversion of masked arrays ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_masked4.py", line 30, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpymm1ra1u.nc' ====================================================================== ERROR: runTest (tst_masked6.GlobalSetAlwaysMaskTest) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_masked6.py", line 89, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpxhfay1vz.nc' ====================================================================== ERROR: test_always_mask (tst_masked6.SetAlwaysMaskTrue) Testing auto-conversion of masked arrays with no missing values to regular arrays. ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_masked6.py", line 23, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpifmblsoe.nc' ====================================================================== ERROR: test_always_mask (tst_masked6.SetAlwyasMaskFalse) Testing auto-conversion of masked arrays with no missing values to regular arrays. ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_masked6.py", line 23, in setUp f = Dataset(self.testfile, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpudn5w8od.nc' ====================================================================== ERROR: runTest (tst_vars.VariablesTestCase) testing primitive variables ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_vars.py", line 30, in setUp f = netCDF4.Dataset(self.file, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpm217lhph.nc' ====================================================================== ERROR: runTest (tst_chunk_cache.RefCountTestCase) testing methods for accessing and changing chunk cache ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_chunk_cache.py", line 14, in setUp nc = netCDF4.Dataset(file_name, mode='w', format='NETCDF4') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpwz8l_bgs.nc' ====================================================================== ERROR: runTest (tst_masked.PrimitiveTypesTestCase) testing auto-conversion of masked arrays and packed integers ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_masked.py", line 44, in setUp file = netCDF4.Dataset(self.file,'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpild5esa9.nc' ====================================================================== ERROR: test_reports_alignment_capabilities (tst_alignment.AlignmentTestCase) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_alignment.py", line 36, in setUp f = Dataset(self.file, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpb5wepugw.nc' ====================================================================== ERROR: test_setting_alignment (tst_alignment.AlignmentTestCase) Opened "/tmp/tmpqexgozg1.nc" with sec2 driver. ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_alignment.py", line 36, in setUp f = Dataset(self.file, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpb5wepugw.nc' ====================================================================== ERROR: test_version_settings (tst_alignment.AlignmentTestCase) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/python-netcdf4/src/netCDF4-1.6.2/test/tst_alignment.py", line 36, in setUp f = Dataset(self.file, 'w') File "src/netCDF4/_netCDF4.pyx", line 2463, in netCDF4._netCDF4.Dataset.__init__ File "src/netCDF4/_netCDF4.pyx", line 2026, in netCDF4._netCDF4._ensure_nc_success PermissionError: [Errno 13] Permission denied: b'/tmp/tmpb5wepugw.nc' ---------------------------------------------------------------------- Ran 100 tests in 8.672s FAILED (errors=30) not running tst_compression_zstd.py ... not running tst_compression_bzip2.py ... not running tst_compression_blosc.py ... not running tst_dap.py ... netcdf4-python version: 1.6.2 HDF5 lib version: 1.12.2 netcdf lib version: 4.9.0 numpy version 1.23.5 cython version 0.29.32 ==> ERROR: A failure occurred in check().  Aborting... ==> ERROR: Build failed, check /var/lib/archbuild/extra-riscv64/felix8/build receiving incremental file list python-netcdf4-1.6.2-1-riscv64-build.log python-netcdf4-1.6.2-1-riscv64-check.log python-netcdf4-1.6.2-1-riscv64-prepare.log sent 81 bytes received 5,513 bytes 11,188.00 bytes/sec total size is 35,809 speedup is 6.40