==>(B Building on minun(B ==>(B Checking for remote environment...(B ==>(B Syncing package to remote host...(B sending incremental file list ./ .SRCINFO 700 40% 0.00kB/s 0:00:00 1,739 100% 1014.65kB/s 0:00:00 (xfr#1, to-chk=7/9) .nvchecker.toml 149 100% 145.51kB/s 0:00:00 149 100% 145.51kB/s 0:00:00 (xfr#2, to-chk=6/9) LICENSE 646 100% 630.86kB/s 0:00:00 646 100% 630.86kB/s 0:00:00 (xfr#3, to-chk=5/9) PKGBUILD 700 27% 683.59kB/s 0:00:00 2,556 100% 2.44MB/s 0:00:00 (xfr#4, to-chk=4/9) REUSE.toml 375 100% 366.21kB/s 0:00:00 375 100% 366.21kB/s 0:00:00 (xfr#5, to-chk=3/9) python-scikit-image-0.26.0-2.log 815 100% 795.90kB/s 0:00:00 815 100% 795.90kB/s 0:00:00 (xfr#6, to-chk=2/9) LICENSES/ sent 1,106 bytes received 210 bytes 2,632.00 bytes/sec total size is 5,679 speedup is 4.32 ==>(B Applying RISC-V patches...(B sending incremental file list riscv64.patch 392 100% 0.00kB/s 0:00:00 392 100% 0.00kB/s 0:00:00 (xfr#1, to-chk=0/2) sent 120 bytes received 41 bytes 322.00 bytes/sec total size is 392 speedup is 2.43 patching file PKGBUILD ==>(B Patching arch to riscv64...(B ==>(B Running pkgctl build --arch riscv64 on remote host...(B ==> WARNING:(B invalid architecture: riscv64(B ==>(B Updating pacman database cache(B [?25l:: Synchronizing package databases... core downloading... extra downloading... multilib downloading... [?25h==>(B Building python-scikit-image(B  ->(B repo: extra(B  ->(B arch: riscv64(B  ->(B worker: felix-4(B ==>(B Building python-scikit-image for [extra] (riscv64)(B ]3008;start=ba70ec6bca874a72a806f5658126d770;user=felix;hostname=minun.felixc.at;machineid=0ffe3ef7ad56462790c2861f2a747f6b;bootid=f922247fefdd4795a51f2605d509217c;pid=3816688;pidfdid=96102126;comm=sudo;targetuser=root;type=session\Note: in a future version of systemd-nspawn the default set of permitted socket address families will be restricted to AF_INET, AF_INET6 and AF_UNIX. Use --restrict-address-families= to configure the set of permitted socket address families, or set RestrictAddressFamilies= in a .nspawn file. ]3008;start=1478e01395d44bbcbeac73043ab6cee8;user=root;hostname=minun.felixc.at;machineid=0ffe3ef7ad56462790c2861f2a747f6b;bootid=f922247fefdd4795a51f2605d509217c;pid=3816733;pidfdid=95907825;comm=systemd-nspawn;container=arch-nspawn-3816733;type=container\]11;?\]2;πŸ”΅ Container arch-nspawn-3816733 on minun.felixc.at\[?25l:: Synchronizing package databases... core downloading... extra downloading... :: Starting full system upgrade... there is nothing to do [?25h[!p]104\[?7h]3008;end=1478e01395d44bbcbeac73043ab6cee8\==>(B Building in chroot for [extra] (riscv64)...(B ==>(B Synchronizing chroot copy [/var/lib/archbuild/extra-riscv64/root] -> [felix-4]...(Bdone(B ]3008;start=4621d35f165e49ab89d8288d008bfd9c;user=root;hostname=minun.felixc.at;machineid=0ffe3ef7ad56462790c2861f2a747f6b;bootid=f922247fefdd4795a51f2605d509217c;pid=3816944;pidfdid=96102175;comm=sudo;targetuser=felix;type=session\==>(B Making package: python-scikit-image 0.26.0-2 (Sun Sep 27 21:30:16 2026)(B ==>(B Retrieving sources...(B  ->(B Found python-scikit-image-0.26.0.tar.gz(B ==>(B Validating source files with b2sums...(B python-scikit-image-0.26.0.tar.gz ... Passed ]3008;end=4621d35f165e49ab89d8288d008bfd9c\Note: in a future version of systemd-nspawn the default set of permitted socket address families will be restricted to AF_INET, AF_INET6 and AF_UNIX. Use --restrict-address-families= to configure the set of permitted socket address families, or set RestrictAddressFamilies= in a .nspawn file. ]3008;start=7a450cc381b24099b4b3eebb01bd061f;user=root;hostname=minun.felixc.at;machineid=0ffe3ef7ad56462790c2861f2a747f6b;bootid=f922247fefdd4795a51f2605d509217c;pid=3818389;pidfdid=96117155;comm=systemd-nspawn;container=makechrootpkg-python-scikit-image.build.3816709;type=container\]11;?\]2;πŸ”΅ Container makechrootpkg-python-scikit-image.build.3816709 on minun.felixc.at\]3008;start=82d6e5aa95c549579df299fd88fcbe55;user=root;hostname=makechrootpkg-python-scikit-image.build.3816709;machineid=686ea3b730154f12ba9740086cfe1c96;bootid=d9cadf4f87a64176a1330ba0e78ffd20;pid=34;pidfdid=96149574;comm=sudo;targetuser=builduser;type=session\==>(B Making package: python-scikit-image 0.26.0-2 (Sun Sep 27 19:30:43 2026)(B ==>(B Checking runtime dependencies...(B ==>(B Installing missing dependencies...(B ]3008;start=9feff518e0f04ba585f23aa4fc046416;user=builduser;hostname=makechrootpkg-python-scikit-image.build.3816709;machineid=686ea3b730154f12ba9740086cfe1c96;bootid=d9cadf4f87a64176a1330ba0e78ffd20;pid=3207;pidfdid=96125325;comm=sudo;targetuser=root;type=session\[?25lresolving dependencies... looking for conflicting packages... Package (56) New Version Net Change Download Size extra/aom 3.15.1-1 4.98 MiB extra/blas 3.12.1-2 0.43 MiB extra/cblas 3.12.1-2 0.31 MiB extra/dav1d 1.5.4-1 0.71 MiB extra/freetype2 2.14.3-1 1.61 MiB extra/fribidi 1.0.17-1 0.25 MiB extra/graphite 1:1.3.15-1 0.18 MiB extra/harfbuzz 14.5.0-1 4.81 MiB extra/jbigkit 2.1-8 0.13 MiB extra/lapack 3.12.1-2 9.09 MiB extra/lcms2 2.19.1-1 0.66 MiB extra/libavif 1.4.2-1 0.77 MiB extra/libdeflate 1.26-1 0.10 MiB extra/libimagequant 4.4.1-2 0.55 MiB extra/libjpeg-turbo 3.2.0-2 2.24 MiB extra/libpng 1.6.58-2 0.54 MiB extra/libraqm 0.11.0-1 0.19 MiB extra/libtiff 4.7.2-1 1.18 MiB extra/libwebp 1.6.0-2 0.64 MiB extra/libxau 1.0.12-1 0.02 MiB extra/libxcb 1.17.0-1 3.69 MiB extra/libxdmcp 1.1.5-2 0.13 MiB extra/libyuv r2921+644251f25-1 1.16 MiB extra/openjpeg2 2.5.4-1 13.30 MiB extra/python-certifi 2026.07.22-1 0.02 MiB extra/python-charset-normalizer 3.5.1-1 0.63 MiB 0.12 MiB extra/python-contourpy 1.4.0-1 0.91 MiB extra/python-cycler 0.12.1-4 0.07 MiB 0.02 MiB extra/python-dateutil 2.9.0-8.1 1.03 MiB extra/python-fonttools 4.66.0-1 21.98 MiB extra/python-idna 3.20-1 0.68 MiB extra/python-importlib-metadata 9.0.1-1 0.26 MiB extra/python-kiwisolver 1.5.1-1 0.14 MiB extra/python-matplotlib 3.11.2-1 31.91 MiB extra/python-pandas 2.3.3-7 107.55 MiB extra/python-platformdirs 4.11.14-1 0.51 MiB extra/python-pooch 1.9.0-1 0.75 MiB extra/python-pyparsing 3.3.3-1 1.62 MiB 0.26 MiB extra/python-pytz 2026.1-1 0.17 MiB extra/python-requests 2.34.2-1 0.76 MiB 0.14 MiB extra/python-six 1.17.0-3 0.12 MiB extra/python-urllib3 2.6.3-1 1.44 MiB extra/python-zipp 3.21.0-4 0.08 MiB extra/qhull 2020.2-6 14.62 MiB extra/rav1e 0.8.1-3 4.85 MiB extra/svt-av1 4.2.0-1 2.16 MiB extra/xcb-proto 1.17.0-4 1.03 MiB extra/xorgproto 2025.1-1 1.47 MiB extra/python-imageio 2.37.4-1 3.63 MiB extra/python-lazy-loader 0.5-1 0.05 MiB extra/python-networkx 3.6.1-1 24.40 MiB extra/python-numpy 2.5.3-1 42.54 MiB extra/python-packaging 26.3-1 1.58 MiB extra/python-pillow 12.3.0-1 4.85 MiB extra/python-scipy 1.18.1-1 112.78 MiB extra/python-tifffile 2026.9.20-1 3.82 MiB Total Download Size: 0.54 MiB Total Installed Size: 436.09 MiB :: Proceed with installation? [Y/n] :: Retrieving packages... python-pyparsing-3.3.3-1-any downloading... python-requests-2.34.2-1-any downloading... python-charset-normalizer-3.5.1-1-any downloading... python-cycler-0.12.1-4-any downloading... checking keyring... checking package integrity... loading package files... checking for file conflicts... :: Processing package changes... installing blas... installing cblas... installing lapack... installing python-numpy... Optional dependencies for python-numpy blas-openblas: faster linear algebra installing python-packaging... installing libpng... installing freetype2... Optional dependencies for freetype2 harfbuzz: Improved autohinting [pending] installing libjpeg-turbo... installing jbigkit... installing libdeflate... installing libwebp... Optional dependencies for libwebp libwebp-utils: WebP conversion and inspection tools installing libtiff... Optional dependencies for libtiff freeglut: for using tiffgt installing lcms2... installing aom... installing dav1d... Optional dependencies for dav1d dav1d-doc: HTML documentation installing libyuv... installing rav1e... installing svt-av1... installing libavif... installing fribidi... installing graphite... Optional dependencies for graphite graphite-docs: Documentation installing harfbuzz... Optional dependencies for harfbuzz harfbuzz-utils: utilities installing libraqm... installing openjpeg2... installing libimagequant... installing xcb-proto... installing xorgproto... installing libxdmcp... installing libxau... installing libxcb... installing python-pillow... Optional dependencies for python-pillow libwebp: for webp images [installed] tk: for the ImageTK module python-olefile: OLE2 file support python-pyqt6: for the ImageQt module python-defusedxml: for reading XMP tags installing python-imageio... Optional dependencies for python-imageio python-av: for the PyAV plugin python-opencv: for the OpenCV plugin python-tifffile: for the TIFF plugin [pending] python-rawpy: for the RawPy plugin freeimage: for the FreeImage plugin (legacy) python-astropy: for the FITS plugin (legacy) python-imageio-ffmpeg: for the FFMPEG plugin (legacy) python-gdal: for the GDAL plugin (legacy) python-simpleitk: for the ITK plugin (legacy) installing python-zipp... installing python-importlib-metadata... installing python-lazy-loader... installing python-platformdirs... installing python-charset-normalizer... installing python-idna... installing python-urllib3... Optional dependencies for python-urllib3 python-brotli: Brotli support python-brotlicffi: Brotli support python-h2: HTTP/2 support python-pysocks: SOCKS support installing python-certifi... installing python-requests... Optional dependencies for python-requests python-chardet: alternative character encoding library python-pysocks: SOCKS proxy support installing python-pooch... Optional dependencies for python-pooch python-paramiko: for SFTP downloads python-tqdm: for printing a download progress bar installing python-scipy... Optional dependencies for python-scipy python-pillow: for image saving module [installed] installing python-contourpy... Optional dependencies for python-contourpy python-matplotlib: matplotlib renderer [pending] installing python-cycler... installing python-six... installing python-dateutil... installing python-fonttools... Optional dependencies for python-fonttools python-brotli: to compress/decompress WOFF 2.0 web fonts python-fs: to read/write UFO source files python-lxml: faster backend for XML files reading/writing python-lz4: for graphite type tables in ttLib/tables python-matplotlib: for visualizing DesignSpaceDocument and resulting VariationModel [pending] python-pyqt5: for drawing glyphs with Qt’s QPainterPath python-reportlab: to drawing glyphs as PNG images python-scipy: for finding wrong contour/component order between different masters [installed] python-sympy: for symbolic font statistics analysis python-uharfbuzz: to use the Harfbuzz Repacker for packing GSUB/GPOS tables python-unicodedata2: for displaying the Unicode character names when dumping the cmap table with ttx python-zopfli: faster backend fom WOFF 1.0 web fonts compression installing python-kiwisolver... installing python-pyparsing... Optional dependencies for python-pyparsing python-railroad-diagrams: for generating Railroad Diagrams python-jinja: for generating Railroad Diagrams installing qhull... installing python-matplotlib... Optional dependencies for python-matplotlib tk: Tk{Agg,Cairo} backends pyside6: alternative for Qt6{Agg,Cairo} backends python-pyqt6: Qt6{Agg,Cairo} backends python-gobject: for GTK{3,4}{Agg,Cairo} backend python-wxpython: WX{Agg,Cairo} backend python-cairo: {GTK{3,4},Qt{5,6},Tk,WX}Cairo backends python-cairocffi: alternative for Cairo backends python-tornado: WebAgg backend ffmpeg: for saving movies imagemagick: for saving animated gifs ghostscript: usetex dependencies texlive-binextra: usetex dependencies texlive-fontsrecommended: usetex dependencies texlive-latexrecommended: usetex usage with pdflatex python-certifi: https support [installed] installing python-pytz... installing python-pandas... Optional dependencies for python-pandas python-pandas-datareader: pandas.io.data replacement (recommended) python-numexpr: accelerating certain numerical operations (recommended) python-bottleneck: accelerating certain types of nan evaluations (recommended) python-matplotlib: plotting [installed] python-jinja: conditional formatting with DataFrame.style python-tabulate: printing in Markdown-friendly format python-scipy: miscellaneous statistical functions [installed] python-numba: alternative execution engine python-xarray: pandas-like API for N-dimensional data python-xlrd: Excel XLS input python-xlwt: Excel XLS output python-openpyxl: Excel XLSX input/output python-xlsxwriter: alternative Excel XLSX output python-beautifulsoup4: read_html function (in any case) python-html5lib: read_html function (and/or python-lxml) python-lxml: read_xml, to_xml and read_html function (and/or python-html5lib) python-sqlalchemy: SQL database support python-psycopg2: PostgreSQL engine for sqlalchemy python-pymysql: MySQL engine for sqlalchemy python-pytables: HDF5-based reading / writing python-blosc: for msgpack compression using blosc zlib: compression for msgpack [installed] python-pyarrow: Parquet, ORC and feather reading/writing python-fsspec: handling files aside from local and HTTP python-qtpy: read_clipboard function (only one needed) xclip: read_clipboard function (only one needed) xsel: read_clipboard function (only one needed) python-brotli: Brotli compression python-snappy: Snappy compression python-zstandard: Zstandard (zstd) compression installing python-networkx... Optional dependencies for python-networkx python-lxml: for GraphML XML format python-pydot: for graph drawing and graph layout algorithms in pure Python via GraphViz python-pygraphviz: for graph drawing and graph layout algorithms with bindings to GraphViz python-sympy: for polynomial algorithms installing python-tifffile... Optional dependencies for python-tifffile python-fsspec: for opening ReferenceFileSystem files python-imagecodecs: for encoding or decoding LZW, JPEG, etc. compressed segments python-lxml: for validating and printing XML python-matplotlib: for plotting [installed] python-zarr: for opening Zarr stores tk: for Tkinter file open dialog :: Running post-transaction hooks... (1/1) Arming ConditionNeedsUpdate... [?25h]3008;end=9feff518e0f04ba585f23aa4fc046416\==>(B Checking buildtime dependencies...(B ==>(B Installing missing dependencies...(B ]3008;start=9a55638b0b06491c949844ae0daf0a51;user=builduser;hostname=makechrootpkg-python-scikit-image.build.3816709;machineid=686ea3b730154f12ba9740086cfe1c96;bootid=d9cadf4f87a64176a1330ba0e78ffd20;pid=3866;pidfdid=96130319;comm=sudo;targetuser=root;type=session\[?25lresolving dependencies... looking for conflicting packages... warning: insufficient columns available for table display Packages (54) boost-1.92.0-1 cfitsio-1:4.7.0-1 erfa-2.0.1-2 libyaml-0.2.5-3 meson-1.12.1-1 ninja-1.13.2-3 patchelf-0.19.1-1 python-astropy-iers-data-0.2026.6.22.1.23.34-1 python-autocommand-2.2.2-9 python-beniget-0.5.0-2 python-click-8.3.3-1 python-cloudpickle-3.1.2-3 python-fsspec-2026.9.0-1 python-gast-0.7.0-3 python-iniconfig-2.3.0-1 python-jaraco.collections-5.1.0-3 python-jaraco.context-6.1.2-1 python-jaraco.functools-4.1.0-3 python-jaraco.text-4.0.0-4 python-joblib-1.6.0-2 python-locket-1.0.0-7 python-markdown-it-py-4.2.0-1 python-markupsafe-3.0.3-1 python-mdurl-0.1.2-9 python-more-itertools-11.1.0-1 python-narwhals-2.26.0-1 python-partd-1.4.2-2 python-pluggy-1.6.0-3.1 python-ply-3.11-17 python-pyerfa-2.0.1.5-3 python-pygments-2.21.0-1 python-pyproject-hooks-1.3.3-1 python-pyproject-metadata-0.9.0-3 python-rich-15.0.0-1 python-setuptools-1:84.0.0-1 python-threadpoolctl-3.6.0-1 python-toolz-1.1.0-2 python-tqdm-4.70.1-1 python-werkzeug-3.1.8-1 python-wheel-0.48.0-1 python-yaml-6.0.3-2 wcslib-8.10-1 xsimd-14.3.0-1 cython-3.3.0-2 meson-python-0.22.0-1 python-astropy-8.0.1-1 python-build-1.6.0-1 python-dask-2026.8.0-1.1 python-installer-1.0.1-1 python-pytest-1:9.1.1-1 python-pytest-localserver-0.10.0-1 python-pytest-pretty-1.3.0-2 python-pythran-0.19.0-1 python-scikit-learn-1.9.1-1 Total Download Size: 32.79 MiB Total Installed Size: 416.86 MiB :: Proceed with installation? [Y/n] :: Retrieving packages... python-scikit-learn-1.9.1-1-riscv64 downloading... python-astropy-8.0.1-1-riscv64 downloading... cython-3.3.0-2-riscv64 downloading... python-dask-2026.8.0-1.1-any downloading... wcslib-8.10-1-riscv64 downloading... python-astropy-iers-data-0.2026.6.22.1.23.34-1-any downloading... python-pythran-0.19.0-1-any downloading... python-narwhals-2.26.0-1-any downloading... python-fsspec-2026.9.0-1-any downloading... xsimd-14.3.0-1-any downloading... python-pyerfa-2.0.1.5-3-riscv64 downloading... erfa-2.0.1-2-riscv64 downloading... meson-python-0.22.0-1-any downloading... python-beniget-0.5.0-2-any downloading... python-pytest-localserver-0.10.0-1-any downloading... python-pytest-pretty-1.3.0-2-any downloading... checking keyring... checking package integrity... loading package files... checking for file conflicts... :: Processing package changes... installing python-pygments... installing python-more-itertools... installing python-jaraco.functools... installing python-jaraco.context... installing python-autocommand... installing python-jaraco.text... Optional dependencies for python-jaraco.text python-inflect: for show-newlines script installing python-jaraco.collections... installing python-wheel... Optional dependencies for python-wheel python-keyring: for wheel.signatures python-xdg: for wheel.signatures python-setuptools: for legacy bdist_wheel subcommand [pending] installing python-setuptools... installing cython... installing ninja... installing python-tqdm... Optional dependencies for python-tqdm python-requests: telegram [installed] installing meson... installing patchelf... installing python-pyproject-metadata... installing meson-python... Optional dependencies for meson-python python-colorama: colored output installing python-pyproject-hooks... installing python-build... Optional dependencies for python-build python-pip: to use as the Python package installer (default) python-uv: to use as the Python package installer python-virtualenv: to use virtualenv for build isolation installing python-installer... installing boost... Optional dependencies for boost python: for python bindings [installed] installing python-gast... installing python-beniget... installing python-ply... installing xsimd... installing python-pythran... installing python-iniconfig... installing python-pluggy... installing python-pytest... installing python-mdurl... installing python-markdown-it-py... Optional dependencies for python-markdown-it-py python-mdit_py_plugins: core plugins python-linkify-it-py: linkify extension installing python-rich... installing python-pytest-pretty... installing python-markupsafe... installing python-werkzeug... Optional dependencies for python-werkzeug python-watchdog: faster and more advanced reloader installing python-pytest-localserver... Optional dependencies for python-pytest-localserver python-aiosmtpd: for smtp installing cfitsio... installing wcslib... installing erfa... installing python-pyerfa... installing libyaml... installing python-yaml... installing python-astropy-iers-data... installing python-astropy... Optional dependencies for python-astropy python-matplotlib: plotting functionality astropy.visualization [installed] python-scipy: variety of features in several modules [installed] python-certifi [installed] python-dask [pending] python-h5py: read/write Table objects from/to HDF5 files python-beautifulsoup4: read Table objects from HTML files python-html5lib: read Table objects from HTML files using the pandas reader python-bleach: sanitize text when disabling HTML escaping in the Table HTML writer libxml2: validates VOTABLE XML files [installed] python-pandas: convert Table objects from/to pandas DataFrame objects [installed] python-sortedcontainers: faster SCEngine indexing engine with Table python-pytz: specify and convert between timezones [installed] python-setuptools: discovery of entry points which are used to insert fitters into astropy.modeling.fitting [installed] python-mpmath: β€˜kraft-burrows-nousek’ interval in poisson_conf_interval python-bottleneck: improves the performance of sigma-clipping and other functionality that may require computing statistics on arrays with NaN values python-pyarrow: read/write Table objects from/to Parquet files python-fsspec: opening remote and cloud-hosted FITS files [pending] installing python-click... installing python-cloudpickle... installing python-fsspec... Optional dependencies for python-fsspec python-aiohttp: HTTP support python-distributed: Dask support python-libarchive-c: archives support python-lz4: LZ4 compression support python-paramiko: SFTP support python-pyarrow: Arrow/Parquet support python-pygit2: git support python-requests: web protocols support [installed] python-smbprotocol: SMB support python-snappy: snappy compression support python-tqdm: progress bar support [installed] installing python-locket... installing python-toolz... installing python-partd... Optional dependencies for python-partd python-blosc python-numpy [installed] python-pandas [installed] python-pyzmq installing python-dask... Optional dependencies for python-dask python-distributed: distributed computing python-graphviz: graph visualization using the graphviz engine python-jinja: HTML representations of Dask objects in Jupyter notebooks python-lz4: transparent use of lz4 compression algorithm python-matplotlib: color map support for graph visualization [installed] python-numpy: arrays and dataframes support [installed] python-pandas: dataframes support [installed] python-psutil: more accurate CPU count python-pyarrow: Apache Arrow, for parquet support python-scipy: for dask.array.stats, dask.array.fft, and dask.array.linalg.lu [installed] python-snappy: snappy compression for reading/writing Avro or Parquet files python-sqlalchemy: writing and reading from SQL databases python-xarray: N-D labeled arrays and datasets python-xxhash: faster hashing of arrays installing python-joblib... Optional dependencies for python-joblib python-distributed: for dask parallel backend python-lz4: for compressed serialization python-numpy: for array manipulation [installed] python-psutil: to mitigate memory leaks in worker processes installing python-narwhals... Optional dependencies for python-narwhals python-pandas: for Pandas support [installed] python-pyarrow: for PyArrows support python-polars: for Polars support installing python-threadpoolctl... installing python-scikit-learn... Optional dependencies for python-scikit-learn python-matplotlib: plotting capabilities [installed] :: Running post-transaction hooks... (1/1) Arming ConditionNeedsUpdate... [?25h]3008;end=9a55638b0b06491c949844ae0daf0a51\==>(B Retrieving sources...(B  ->(B Found python-scikit-image-0.26.0.tar.gz(B ==> WARNING:(B Skipping all source file integrity checks.(B ==>(B Extracting sources...(B  ->(B Extracting python-scikit-image-0.26.0.tar.gz with bsdtar(B ==>(B Starting build()...(B * Getting build dependencies for wheel... * Building wheel... + meson setup /build/python-scikit-image/src/scikit-image-0.26.0 /build/python-scikit-image/src/scikit-image-0.26.0/.mesonpy-t9ycrktc -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --native-file=/build/python-scikit-image/src/scikit-image-0.26.0/.mesonpy-t9ycrktc/meson-python-native-file.ini The Meson build system Version: 1.12.1 Source dir: /build/python-scikit-image/src/scikit-image-0.26.0 Build dir: /build/python-scikit-image/src/scikit-image-0.26.0/.mesonpy-t9ycrktc Build type: native build Project name: scikit-image Project version: 0.26.0 C compiler for the host machine: cc (gcc 16.2.1 "cc (GCC) 16.2.1 20260810") C linker for the host machine: cc ld.bfd 2.47 C++ compiler for the host machine: c++ (gcc 16.2.1 "c++ (GCC) 16.2.1 20260810") C++ linker for the host machine: c++ ld.bfd 2.47 Cython compiler for the host machine: cython (cython 3.3.0) Host machine cpu family: riscv64 Host machine cpu: riscv64 Compiler for C supports arguments -Wno-unused-function: YES Library m found: YES Checking if "-Wl,--version-script" links: YES Program cython found: YES (/usr/bin/cython) Program pythran found: YES (/usr/bin/pythran) Program cp found: YES (/usr/bin/cp) Program python found: YES (/usr/bin/python) Found pkg-config: YES (/usr/bin/pkg-config) 3.0.7 Run-time dependency python found: YES 3.14 Program _build_utils/cythoner.py found: YES (/build/python-scikit-image/src/scikit-image-0.26.0/src/skimage/_build_utils/cythoner.py) Compiler for C++ supports arguments -Wno-cpp: YES Run-time dependency python found: YES 3.14 Build targets in project: 57 scikit-image 0.26.0 User defined options Native files: /build/python-scikit-image/src/scikit-image-0.26.0/.mesonpy-t9ycrktc/meson-python-native-file.ini b_ndebug : if-release b_vscrt : md buildtype : release Found ninja-1.13.2 at /usr/bin/ninja Generating targets: 0%| | 0/57 eta ? Generating targets: 5%|β–Œ | 3/57 eta 00:01 Generating targets: 23%|β–ˆβ–ˆβ–Ž | 13/57 eta 00:02 Generating targets: 49%|β–ˆβ–ˆβ–ˆβ–ˆβ–‰ | 28/57 eta 00:00 Generating targets: 75%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–Œ | 43/57 eta 00:00 Generating targets: 100%|β–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆβ–ˆ| 57/57 eta 00:00 Writing build.ninja: 0%| | 0/245 eta ? + /usr/bin/ninja [1/165] Generating src/skimage/morphology/_skeletonize_lee_cy with a custom command [2/165] Generating src/skimage/feature/_brief_pythran with a custom command [3/165] Generating src/skimage/feature/_hessian_det_appx_pythran with a custom command [4/165] Generating 'src/skimage/measure/_ccomp.cpython-314-riscv64-linux-gnu.so.p/_ccomp.c' [5/165] Generating 'src/skimage/graph/heap.cpython-314-riscv64-linux-gnu.so.p/heap.c' [6/165] Generating 'src/skimage/_shared/fast_exp.cpython-314-riscv64-linux-gnu.so.p/fast_exp.c' [7/165] Generating 'src/skimage/feature/censure_cy.cpython-314-riscv64-linux-gnu.so.p/censure_cy.c' [8/165] Generating 'src/skimage/graph/_ncut_cy.cpython-314-riscv64-linux-gnu.so.p/_ncut_cy.c' [9/165] Generating 'src/skimage/feature/_hoghistogram.cpython-314-riscv64-linux-gnu.so.p/_hoghistogram.c' [10/165] Generating 'src/skimage/feature/_canny_cy.cpython-314-riscv64-linux-gnu.so.p/_canny_cy.c' [11/165] Generating 'src/skimage/measure/_find_contours_cy.cpython-314-riscv64-linux-gnu.so.p/_find_contours_cy.c' [12/165] Generating 'src/skimage/measure/_moments_cy.cpython-314-riscv64-linux-gnu.so.p/_moments_cy.c' [13/165] Generating 'src/skimage/feature/corner_cy.cpython-314-riscv64-linux-gnu.so.p/corner_cy.c' [14/165] Generating 'src/skimage/_shared/geometry.cpython-314-riscv64-linux-gnu.so.p/geometry.c' [15/165] Generating 'src/skimage/filters/_multiotsu.cpython-314-riscv64-linux-gnu.so.p/_multiotsu.c' [16/165] Generating 'src/skimage/morphology/_convex_hull.cpython-314-riscv64-linux-gnu.so.p/_convex_hull.c' [17/165] Generating 'src/skimage/graph/_spath.cpython-314-riscv64-linux-gnu.so.p/_spath.c' [18/165] Generating 'src/skimage/measure/_pnpoly.cpython-314-riscv64-linux-gnu.so.p/_pnpoly.c' [19/165] Generating 'src/skimage/_shared/transform.cpython-314-riscv64-linux-gnu.so.p/transform.c' [20/165] Generating 'src/skimage/feature/_sift.cpython-314-riscv64-linux-gnu.so.p/_sift.c' [21/165] Generating 'src/skimage/morphology/_extrema_cy.cpython-314-riscv64-linux-gnu.so.p/_extrema_cy.c' [22/165] Generating 'src/skimage/filters/rank/core_cy_3d.cpython-314-riscv64-linux-gnu.so.p/core_cy_3d.c' [23/165] Generating 'src/skimage/draw/_draw.cpython-314-riscv64-linux-gnu.so.p/_draw.c' [24/165] Generating 'src/skimage/filters/rank/bilateral_cy.cpython-314-riscv64-linux-gnu.so.p/bilateral_cy.c' [25/165] Generating 'src/skimage/morphology/_flood_fill_cy.cpython-314-riscv64-linux-gnu.so.p/_flood_fill_cy.c' [26/165] Generating 'src/skimage/graph/_mcp.cpython-314-riscv64-linux-gnu.so.p/_mcp.c' [27/165] Generating 'src/skimage/measure/_marching_cubes_lewiner_cy.cpython-314-riscv64-linux-gnu.so.p/_marching_cubes_lewiner_cy.c' [28/165] Generating 'src/skimage/filters/rank/core_cy.cpython-314-riscv64-linux-gnu.so.p/core_cy.c' [29/165] Generating 'src/skimage/feature/_haar.cpython-314-riscv64-linux-gnu.so.p/_haar.cpp' [30/165] Compiling C object src/skimage/_shared/fast_exp.cpython-314-riscv64-linux-gnu.so.p/meson-generated_fast_exp.c.o [31/165] Generating 'src/skimage/morphology/_grayreconstruct.cpython-314-riscv64-linux-gnu.so.p/_grayreconstruct.c' [32/165] Generating 'src/skimage/morphology/_skeletonize_lee_cy.cpython-314-riscv64-linux-gnu.so.p/_skeletonize_lee_cy.cpp' [33/165] Generating 'src/skimage/filters/rank/percentile_cy.cpython-314-riscv64-linux-gnu.so.p/percentile_cy.c' [34/165] Generating 'src/skimage/segmentation/_felzenszwalb_cy.cpython-314-riscv64-linux-gnu.so.p/_felzenszwalb_cy.c' [35/165] Compiling C object src/skimage/_shared/transform.cpython-314-riscv64-linux-gnu.so.p/meson-generated_transform.c.o [36/165] Generating 'src/skimage/morphology/_skeletonize_various_cy.cpython-314-riscv64-linux-gnu.so.p/_skeletonize_various_cy.c' [37/165] Generating 'src/skimage/morphology/_misc_cy.cpython-314-riscv64-linux-gnu.so.p/_misc_cy.c' [38/165] Compiling C object src/skimage/_shared/geometry.cpython-314-riscv64-linux-gnu.so.p/meson-generated_geometry.c.o [39/165] Generating 'src/skimage/restoration/_inpaint.cpython-314-riscv64-linux-gnu.so.p/_inpaint.c' [40/165] Generating 'src/skimage/morphology/_max_tree.cpython-314-riscv64-linux-gnu.so.p/_max_tree.c' [41/165] Generating 'src/skimage/restoration/_unwrap_1d.cpython-314-riscv64-linux-gnu.so.p/_unwrap_1d.c' [42/165] Generating 'src/skimage/restoration/_unwrap_2d.cpython-314-riscv64-linux-gnu.so.p/_unwrap_2d.c' [43/165] Generating 'src/skimage/restoration/_unwrap_3d.cpython-314-riscv64-linux-gnu.so.p/_unwrap_3d.c' [44/165] Compiling C object src/skimage/feature/censure_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated_censure_cy.c.o [45/165] Generating 'src/skimage/segmentation/_quickshift_cy.cpython-314-riscv64-linux-gnu.so.p/_quickshift_cy.c' [46/165] Generating 'src/skimage/restoration/_rolling_ball_cy.cpython-314-riscv64-linux-gnu.so.p/_rolling_ball_cy.c' [47/165] Generating 'src/skimage/segmentation/_slic.cpython-314-riscv64-linux-gnu.so.p/_slic.c' [48/165] Compiling C object src/skimage/feature/_canny_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__canny_cy.c.o [49/165] Compiling C object src/skimage/feature/corner_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated_corner_cy.c.o [50/165] Generating 'src/skimage/transform/_radon_transform.cpython-314-riscv64-linux-gnu.so.p/_radon_transform.c' [51/165] Compiling C object src/skimage/feature/_hoghistogram.cpython-314-riscv64-linux-gnu.so.p/meson-generated__hoghistogram.c.o [52/165] Generating 'src/skimage/segmentation/_watershed_cy.cpython-314-riscv64-linux-gnu.so.p/_watershed_cy.c' [53/165] Generating 'src/skimage/restoration/_nl_means_denoising.cpython-314-riscv64-linux-gnu.so.p/_nl_means_denoising.c' [54/165] Compiling C object src/skimage/feature/_sift.cpython-314-riscv64-linux-gnu.so.p/meson-generated__sift.c.o [55/165] Compiling C object src/skimage/draw/_draw.cpython-314-riscv64-linux-gnu.so.p/meson-generated__draw.c.o [56/165] Compiling C object src/skimage/graph/heap.cpython-314-riscv64-linux-gnu.so.p/meson-generated_heap.c.o [57/165] Compiling C object src/skimage/filters/_multiotsu.cpython-314-riscv64-linux-gnu.so.p/meson-generated__multiotsu.c.o [58/165] Compiling C object src/skimage/measure/_ccomp.cpython-314-riscv64-linux-gnu.so.p/meson-generated__ccomp.c.o [59/165] Compiling C object src/skimage/filters/rank/core_cy_3d.cpython-314-riscv64-linux-gnu.so.p/meson-generated_core_cy_3d.c.o [60/165] Compiling C object src/skimage/measure/_find_contours_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__find_contours_cy.c.o [61/165] Compiling C object src/skimage/graph/_spath.cpython-314-riscv64-linux-gnu.so.p/meson-generated__spath.c.o [62/165] Compiling C object src/skimage/measure/_pnpoly.cpython-314-riscv64-linux-gnu.so.p/meson-generated__pnpoly.c.o [63/165] Compiling C object src/skimage/graph/_ncut_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__ncut_cy.c.o [64/165] Compiling C object src/skimage/morphology/_convex_hull.cpython-314-riscv64-linux-gnu.so.p/meson-generated__convex_hull.c.o [65/165] Compiling C object src/skimage/filters/rank/bilateral_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated_bilateral_cy.c.o [66/165] Compiling C object src/skimage/restoration/_unwrap_2d.cpython-314-riscv64-linux-gnu.so.p/unwrap_2d_ljmu.c.o [67/165] Compiling C object src/skimage/measure/_moments_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__moments_cy.c.o [68/165] Generating 'src/skimage/util/_remap.cpython-314-riscv64-linux-gnu.so.p/_remap.cpp' [69/165] Compiling C object src/skimage/restoration/_unwrap_3d.cpython-314-riscv64-linux-gnu.so.p/unwrap_3d_ljmu.c.o [70/165] Compiling C object src/skimage/morphology/_grayreconstruct.cpython-314-riscv64-linux-gnu.so.p/meson-generated__grayreconstruct.c.o [71/165] Compiling C object src/skimage/morphology/_skeletonize_various_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__skeletonize_various_cy.c.o [72/165] Compiling C object src/skimage/measure/_marching_cubes_lewiner_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__marching_cubes_lewiner_cy.c.o [73/165] Compiling C object src/skimage/morphology/_extrema_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__extrema_cy.c.o [74/165] Compiling C object src/skimage/graph/_mcp.cpython-314-riscv64-linux-gnu.so.p/meson-generated__mcp.c.o [75/165] Compiling C object src/skimage/morphology/_flood_fill_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__flood_fill_cy.c.o [76/165] Compiling C object src/skimage/restoration/_inpaint.cpython-314-riscv64-linux-gnu.so.p/meson-generated__inpaint.c.o [77/165] Generating 'src/skimage/_shared/interpolation.cpython-314-riscv64-linux-gnu.so.p/interpolation.c' [78/165] Compiling C object src/skimage/morphology/_misc_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__misc_cy.c.o [79/165] Compiling C object src/skimage/filters/rank/core_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated_core_cy.c.o [80/165] Compiling C object src/skimage/restoration/_unwrap_1d.cpython-314-riscv64-linux-gnu.so.p/meson-generated__unwrap_1d.c.o [81/165] Compiling C object src/skimage/restoration/_unwrap_3d.cpython-314-riscv64-linux-gnu.so.p/meson-generated__unwrap_3d.c.o [82/165] Compiling C object src/skimage/restoration/_unwrap_2d.cpython-314-riscv64-linux-gnu.so.p/meson-generated__unwrap_2d.c.o [83/165] Compiling C++ object src/skimage/feature/brief_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated_.._brief_cy.cpp.o [84/165] Compiling C object src/skimage/segmentation/_felzenszwalb_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__felzenszwalb_cy.c.o [85/165] Compiling C object src/skimage/restoration/_rolling_ball_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__rolling_ball_cy.c.o [86/165] Compiling C++ object src/skimage/feature/_haar.cpython-314-riscv64-linux-gnu.so.p/meson-generated__haar.cpp.o [87/165] Compiling C object src/skimage/filters/rank/percentile_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated_percentile_cy.c.o [88/165] Compiling C object src/skimage/_shared/interpolation.cpython-314-riscv64-linux-gnu.so.p/meson-generated_interpolation.c.o [89/165] Compiling C object src/skimage/segmentation/_slic.cpython-314-riscv64-linux-gnu.so.p/meson-generated__slic.c.o [90/165] Compiling C++ object src/skimage/feature/_hessian_det_appx.cpython-314-riscv64-linux-gnu.so.p/meson-generated_..__hessian_det_appx.cpp.o [91/165] Compiling C object src/skimage/transform/_radon_transform.cpython-314-riscv64-linux-gnu.so.p/meson-generated__radon_transform.c.o [92/165] Compiling C++ object src/skimage/morphology/_skeletonize_lee_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__skeletonize_lee_cy.cpp.o [93/165] Compiling C object src/skimage/restoration/_nl_means_denoising.cpython-314-riscv64-linux-gnu.so.p/meson-generated__nl_means_denoising.c.o [94/165] Generating 'src/skimage/feature/_texture.cpython-314-riscv64-linux-gnu.so.p/_texture.c' [95/165] Compiling C object src/skimage/segmentation/_quickshift_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__quickshift_cy.c.o [96/165] Compiling C object src/skimage/segmentation/_watershed_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__watershed_cy.c.o [97/165] Compiling C object src/skimage/morphology/_max_tree.cpython-314-riscv64-linux-gnu.so.p/meson-generated__max_tree.c.o [98/165] Generating 'src/skimage/feature/orb_cy.cpython-314-riscv64-linux-gnu.so.p/orb_cy.c' [99/165] Generating 'src/skimage/feature/_cascade.cpython-314-riscv64-linux-gnu.so.p/_cascade.cpp' [100/165] Linking target src/skimage/_shared/fast_exp.cpython-314-riscv64-linux-gnu.so [101/165] Linking target src/skimage/feature/_hessian_det_appx.cpython-314-riscv64-linux-gnu.so [102/165] Linking target src/skimage/_shared/interpolation.cpython-314-riscv64-linux-gnu.so [103/165] Compiling C object src/skimage/feature/_texture.cpython-314-riscv64-linux-gnu.so.p/meson-generated__texture.c.o [104/165] Generating 'src/skimage/transform/_warps_cy.cpython-314-riscv64-linux-gnu.so.p/_warps_cy.c' [105/165] Generating 'src/skimage/restoration/_denoise_cy.cpython-314-riscv64-linux-gnu.so.p/_denoise_cy.c' [106/165] Linking target src/skimage/draw/_draw.cpython-314-riscv64-linux-gnu.so [107/165] Generating 'src/skimage/transform/_hough_transform.cpython-314-riscv64-linux-gnu.so.p/_hough_transform.c' [108/165] Linking target src/skimage/graph/heap.cpython-314-riscv64-linux-gnu.so [109/165] Compiling C object src/skimage/feature/orb_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated_orb_cy.c.o [110/165] Linking target src/skimage/_shared/geometry.cpython-314-riscv64-linux-gnu.so [111/165] Linking target src/skimage/feature/brief_cy.cpython-314-riscv64-linux-gnu.so [112/165] Compiling C object src/skimage/transform/_warps_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__warps_cy.c.o [113/165] Linking target src/skimage/feature/_canny_cy.cpython-314-riscv64-linux-gnu.so [114/165] Linking target src/skimage/filters/rank/percentile_cy.cpython-314-riscv64-linux-gnu.so [115/165] Linking target src/skimage/filters/_multiotsu.cpython-314-riscv64-linux-gnu.so [116/165] Linking target src/skimage/feature/censure_cy.cpython-314-riscv64-linux-gnu.so [117/165] Linking target src/skimage/feature/_hoghistogram.cpython-314-riscv64-linux-gnu.so [118/165] Linking target src/skimage/graph/_mcp.cpython-314-riscv64-linux-gnu.so [119/165] Linking target src/skimage/measure/_ccomp.cpython-314-riscv64-linux-gnu.so [120/165] Compiling C object src/skimage/transform/_hough_transform.cpython-314-riscv64-linux-gnu.so.p/meson-generated__hough_transform.c.o [121/165] Linking target src/skimage/filters/rank/core_cy.cpython-314-riscv64-linux-gnu.so [122/165] Generating 'src/skimage/filters/rank/generic_cy.cpython-314-riscv64-linux-gnu.so.p/generic_cy.c' [123/165] Linking target src/skimage/_shared/transform.cpython-314-riscv64-linux-gnu.so [124/165] Linking target src/skimage/feature/_sift.cpython-314-riscv64-linux-gnu.so [125/165] Linking target src/skimage/feature/_haar.cpython-314-riscv64-linux-gnu.so [126/165] Linking target src/skimage/measure/_find_contours_cy.cpython-314-riscv64-linux-gnu.so [127/165] Linking target src/skimage/measure/_marching_cubes_lewiner_cy.cpython-314-riscv64-linux-gnu.so [128/165] Linking target src/skimage/filters/rank/core_cy_3d.cpython-314-riscv64-linux-gnu.so [129/165] Linking target src/skimage/graph/_spath.cpython-314-riscv64-linux-gnu.so [130/165] Linking target src/skimage/graph/_ncut_cy.cpython-314-riscv64-linux-gnu.so [131/165] Linking target src/skimage/feature/corner_cy.cpython-314-riscv64-linux-gnu.so [132/165] Compiling C object src/skimage/restoration/_denoise_cy.cpython-314-riscv64-linux-gnu.so.p/meson-generated__denoise_cy.c.o [133/165] Compiling C++ object src/skimage/feature/_cascade.cpython-314-riscv64-linux-gnu.so.p/meson-generated__cascade.cpp.o [134/165] Linking target src/skimage/measure/_moments_cy.cpython-314-riscv64-linux-gnu.so [135/165] Linking target src/skimage/filters/rank/bilateral_cy.cpython-314-riscv64-linux-gnu.so [136/165] Linking target src/skimage/measure/_pnpoly.cpython-314-riscv64-linux-gnu.so [137/165] Linking target src/skimage/morphology/_convex_hull.cpython-314-riscv64-linux-gnu.so [138/165] Linking target src/skimage/morphology/_extrema_cy.cpython-314-riscv64-linux-gnu.so [139/165] Linking target src/skimage/morphology/_flood_fill_cy.cpython-314-riscv64-linux-gnu.so [140/165] Linking target src/skimage/feature/_texture.cpython-314-riscv64-linux-gnu.so [141/165] Linking target src/skimage/feature/orb_cy.cpython-314-riscv64-linux-gnu.so [142/165] Linking target src/skimage/restoration/_unwrap_2d.cpython-314-riscv64-linux-gnu.so [143/165] Linking target src/skimage/morphology/_skeletonize_lee_cy.cpython-314-riscv64-linux-gnu.so [144/165] Linking target src/skimage/restoration/_unwrap_3d.cpython-314-riscv64-linux-gnu.so [145/165] Linking target src/skimage/morphology/_grayreconstruct.cpython-314-riscv64-linux-gnu.so [146/165] Linking target src/skimage/morphology/_misc_cy.cpython-314-riscv64-linux-gnu.so [147/165] Linking target src/skimage/morphology/_max_tree.cpython-314-riscv64-linux-gnu.so 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tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_x-noise_filter] PASSED [ 16%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_x-entropy] PASSED [ 16%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_x-otsu] PASSED [ 16%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_x-percentile] PASSED [ 16%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_x-windowed_histogram] PASSED [ 16%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-autolevel] PASSED [ 16%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-autolevel_percentile] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-gradient] PASSED [ 17%] 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tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-pop_percentile] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-pop_bilateral] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-sum] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-sum_bilateral] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-sum_percentile] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-threshold] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-threshold_percentile] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-noise_filter] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-entropy] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-otsu] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-percentile] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_boolean_shift[True-shift_y-windowed_histogram] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_x-autolevel] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_x-equalize] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_x-gradient] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_x-majority] PASSED [ 17%] 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tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-autolevel] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-equalize] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-gradient] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-majority] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-maximum] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-mean] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-geometric_mean] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[False-shift_z-subtract_mean] PASSED [ 17%] 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tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-geometric_mean] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-subtract_mean] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-median] PASSED [ 17%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-minimum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-modal] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-enhance_contrast] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-pop] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-sum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-threshold] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-noise_filter] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-entropy] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_x-otsu] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-autolevel] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-equalize] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-gradient] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-majority] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-maximum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-mean] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-geometric_mean] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-subtract_mean] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-median] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-minimum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-modal] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-enhance_contrast] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-pop] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-sum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-threshold] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-noise_filter] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-entropy] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_y-otsu] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-autolevel] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-equalize] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-gradient] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-majority] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-maximum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-mean] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-geometric_mean] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-subtract_mean] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-median] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-minimum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-modal] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-enhance_contrast] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-pop] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-sum] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-threshold] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-noise_filter] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-entropy] PASSED [ 18%] tests/skimage/filters/rank/test_rank.py::TestRank::test_rank_filters_3D_boolean_shift[True-shift_z-otsu] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse_valid_mode PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[uint16-nearest] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[uint16-reflect] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[uint16-mirror] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[int32-nearest] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[int32-reflect] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[int32-mirror] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float16-nearest] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float16-reflect] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float16-mirror] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float32-nearest] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float32-reflect] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float32-mirror] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float64-nearest] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float64-reflect] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse[float64-mirror] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse_invalid_kernel[nearest] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse_invalid_kernel[reflect] PASSED [ 18%] tests/skimage/filters/test_correlate.py::test_correlate_sparse_invalid_kernel[mirror] PASSED [ 18%] tests/skimage/filters/test_edges.py::test_roberts_zeros[float16] PASSED [ 18%] 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test_ellipse_model_estimate[0] tests/skimage/measure/test_fit.py::test_ellipse_model_estimate[15] FAILED [ 65%] [ 65%] tests/skimage/measure/test_fit.py:386 test_ellipse_model_estimate[15] =================================== FAILURES =================================== __________________________ test_circle_model_estimate __________________________ def test_circle_model_estimate(): # generate original data without noise model0 = CircleModel((10, 12), 3) t = np.linspace(0, 2 * np.pi, 1000) data0 = model0.predict_xy(t) # add gaussian noise to data rng = np.random.default_rng(1234) data = data0 + rng.normal(size=data0.shape) # estimate parameters of noisy data (from_estimate method). model_est = CircleModel.from_estimate(data) # test whether estimated parameters almost equal original parameters assert_almost_equal(model0.center, model_est.center, 0) assert_almost_equal(model0.radius, model_est.radius, 0) # estimate method. with pytest.warns(FutureWarning, match='Calling ``CircleModel'): model_est2 = CircleModel() with pytest.warns(FutureWarning, match='`estimate` is deprecated') as record: assert model_est2.estimate(data) > assert_stacklevel(record) E AssertionError: Warning with wrong stacklevel: E Expected: /build/python-scikit-image/src/scikit-image-0.26.0/tests/skimage/measure/test_fit.py:219 E Actual: /build/python-scikit-image/src/scikit-image-0.26.0/test-env/lib/python3.14/site-packages/skimage/measure/fit.py:624 E DeprecationWarning: `minkowski_distance` is deprecated in favor of `scipy.spatial.distance.minkowski` as of SciPy 1.18.0 and will be removed in SciPy 1.20.0. tests/skimage/measure/test_fit.py:220: AssertionError ________________________ test_circle_model_int_overflow ________________________ def test_circle_model_int_overflow(): xy = np.array([[1, 0], [0, 1], [-1, 0], [0, -1]], dtype=np.int32) xy += 500 model = CircleModel.from_estimate(xy) assert_almost_equal(model.center, [500, 500]) assert_almost_equal(model.radius, 1) # estimate method. with pytest.warns(FutureWarning, match='Calling ``CircleModel'): model2 = CircleModel() with pytest.warns(FutureWarning, match='`estimate` is deprecated') as record: assert model2.estimate(xy) > assert_stacklevel(record) E AssertionError: Warning with wrong stacklevel: E Expected: /build/python-scikit-image/src/scikit-image-0.26.0/tests/skimage/measure/test_fit.py:238 E Actual: /build/python-scikit-image/src/scikit-image-0.26.0/test-env/lib/python3.14/site-packages/skimage/measure/fit.py:624 E DeprecationWarning: `minkowski_distance` is deprecated in favor of `scipy.spatial.distance.minkowski` as of SciPy 1.18.0 and will be removed in SciPy 1.20.0. tests/skimage/measure/test_fit.py:239: AssertionError _______________ test_circle_model_estimate_from_small_scale_data _______________ def test_circle_model_estimate_from_small_scale_data(): params = np.array([1.23e-90, 2.34e-90, 3.45e-100], dtype=np.float64) center, radius = params[:2], params[2] angles = np.array( [ 0.107, 0.407, 1.108, 1.489, 2.216, 2.768, 3.183, 3.969, 4.840, 5.387, 5.792, 6.139, ], dtype=np.float64, ) data = CircleModel(center, radius).predict_xy(angles) # assert that far small scale data can be estimated float_data = data.astype(np.float64) model = CircleModel.from_estimate(float_data) # test whether the predicted parameters are close to the original ones assert_almost_equal(center, model.center) assert_almost_equal(radius, model.radius) # estimate method model = CircleModel(*DUMMY_CIRCLE_ARGS) with pytest.warns(FutureWarning, match='`estimate` is deprecated') as record: assert model.estimate(float_data) > assert_stacklevel(record) E AssertionError: Warning with wrong stacklevel: E Expected: /build/python-scikit-image/src/scikit-image-0.26.0/tests/skimage/measure/test_fit.py:324 E Actual: /build/python-scikit-image/src/scikit-image-0.26.0/test-env/lib/python3.14/site-packages/skimage/measure/fit.py:624 E DeprecationWarning: `minkowski_distance` is deprecated in favor of `scipy.spatial.distance.minkowski` as of SciPy 1.18.0 and will be removed in SciPy 1.20.0. tests/skimage/measure/test_fit.py:325: AssertionError ________________________ test_ellipse_model_estimate[0] ________________________ angle = 0 @pytest.mark.parametrize('angle', range(0, 180, 15)) def test_ellipse_model_estimate(angle): rad = np.deg2rad(angle) # generate original data without noise model0 = EllipseModel((10, 20), (15, 25), rad) t = np.linspace(0, 2 * np.pi, 100) data0 = model0.predict_xy(t) # add gaussian noise to data rng = np.random.default_rng(1234) data = data0 + rng.normal(size=data0.shape) # estimate parameters of noisy data > model_est = EllipseModel.from_estimate(data) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ tests/skimage/measure/test_fit.py:400: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ test-env/lib/python3.14/site-packages/skimage/measure/fit.py:851: in from_estimate return super().from_estimate(data) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ test-env/lib/python3.14/site-packages/skimage/measure/fit.py:79: in from_estimate msg = tf._estimate(data, warn_only=False) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = data = array([[ 0.90633076, -0.00401883], [ 1.06561206, 0.11119064], [ 1.06784002, 0.40983984], [ 0.89...-0.32098548], [ 0.82052276, -0.2237043 ], [ 1.06546409, -0.09176052], [ 0.97222829, 0.130423 ]]) warn_only = False def _estimate(self, data, warn_only=True): # Original Implementation: Ben Hammel, Nick Sullivan-Molina # another REFERENCE: [2] http://mathworld.wolfram.com/Ellipse.html _check_data_dim(data, dim=2) if len(data) < 5: return _warn_or_msg( "Need at least 5 data points to estimate an ellipse.", warn_only=warn_only, ) # to prevent integer overflow, cast data to float, if it isn't already float_type = np.promote_types(data.dtype, np.float32) data = data.astype(float_type, copy=False) # normalize value range to avoid misfitting due to numeric errors if # the relative distances are small compared to absolute distances origin = data.mean(axis=0) data = data - origin scale = data.std() if scale < np.finfo(float_type).tiny: return _warn_or_msg( "Standard deviation of data is too small to estimate " "ellipse with meaningful precision.", warn_only=warn_only, ) data /= scale x = data[:, 0] y = data[:, 1] # Quadratic part of design matrix [eqn. 15] from [1] D1 = np.vstack([x**2, x * y, y**2]).T # Linear part of design matrix [eqn. 16] from [1] D2 = np.vstack([x, y, np.ones_like(x)]).T # forming scatter matrix [eqn. 17] from [1] S1 = D1.T @ D1 S2 = D1.T @ D2 S3 = D2.T @ D2 # Constraint matrix [eqn. 18] C1 = np.array([[0.0, 0.0, 2.0], [0.0, -1.0, 0.0], [2.0, 0.0, 0.0]]) try: # Reduced scatter matrix [eqn. 29] M = inv(C1) @ (S1 - S2 @ inv(S3) @ S2.T) except np.linalg.LinAlgError: # LinAlgError: Singular matrix return 'Singular matrix from estimation' # M*|a b c >=l|a b c >. Find eigenvalues and eigenvectors # from this equation [eqn. 28] eig_vals, eig_vecs = np.linalg.eig(M) # eigenvector must meet constraint 4ac - b^2 to be valid. cond = 4 * np.multiply(eig_vecs[0, :], eig_vecs[2, :]) - np.power( eig_vecs[1, :], 2 ) a1 = eig_vecs[:, (cond > 0)] # seeks for empty matrix if 0 in a1.shape or len(a1.ravel()) != 3: return 'Eigenvector constraints not met' a, b, c = a1.ravel() # |d f g> = -S3^(-1)*S2^(T)*|a b c> [eqn. 24] a2 = -inv(S3) @ S2.T @ a1 d, f, g = a2.ravel() # eigenvectors are the coefficients of an ellipse in general form # a*x^2 + 2*b*x*y + c*y^2 + 2*d*x + 2*f*y + g = 0 (eqn. 15) from [2] b /= 2.0 d /= 2.0 f /= 2.0 # finding center of ellipse [eqn.19 and 20] from [2] x0 = (c * d - b * f) / (b**2.0 - a * c) y0 = (a * f - b * d) / (b**2.0 - a * c) # Find the semi-axes lengths [eqn. 21 and 22] from [2] numerator = a * f**2 + c * d**2 + g * b**2 - 2 * b * d * f - a * c * g term = np.sqrt((a - c) ** 2 + 4 * b**2) denominator1 = (b**2 - a * c) * (term - (a + c)) denominator2 = (b**2 - a * c) * (-term - (a + c)) width = np.sqrt(2 * numerator / denominator1) height = np.sqrt(2 * numerator / denominator2) # angle of counterclockwise rotation of major-axis of ellipse # to x-axis [eqn. 23] from [2]. phi = 0.5 * np.arctan((2.0 * b) / (a - c)) if a > c: phi += 0.5 * np.pi # stabilize parameters: # sometimes small fluctuations in data can cause # height and width to swap if width < height: width, height = height, width phi += np.pi / 2 > phi %= np.pi E TypeError: unsupported operand type(s) for %=: 'numpy.complex128' and 'float' test-env/lib/python3.14/site-packages/skimage/measure/fit.py:952: TypeError _______________________ test_ellipse_model_estimate[15] ________________________ angle = 15 @pytest.mark.parametrize('angle', range(0, 180, 15)) def test_ellipse_model_estimate(angle): rad = np.deg2rad(angle) # generate original data without noise model0 = EllipseModel((10, 20), (15, 25), rad) t = np.linspace(0, 2 * np.pi, 100) data0 = model0.predict_xy(t) # add gaussian noise to data rng = np.random.default_rng(1234) data = data0 + rng.normal(size=data0.shape) # estimate parameters of noisy data > model_est = EllipseModel.from_estimate(data) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ tests/skimage/measure/test_fit.py:400: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ test-env/lib/python3.14/site-packages/skimage/measure/fit.py:851: in from_estimate return super().from_estimate(data) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ test-env/lib/python3.14/site-packages/skimage/measure/fit.py:79: in from_estimate msg = tf._estimate(data, warn_only=False) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = data = array([[ 0.87058556, 0.26020483], [ 1.00155704, 0.37104077], [ 0.97589635, 0.66406458], [ 0.77...-0.05016637], [ 0.84146121, 0.04601827], [ 1.0578329 , 0.17573291], [ 0.93641329, 0.39450425]]) warn_only = False def _estimate(self, data, warn_only=True): # Original Implementation: Ben Hammel, Nick Sullivan-Molina # another REFERENCE: [2] http://mathworld.wolfram.com/Ellipse.html _check_data_dim(data, dim=2) if len(data) < 5: return _warn_or_msg( "Need at least 5 data points to estimate an ellipse.", warn_only=warn_only, ) # to prevent integer overflow, cast data to float, if it isn't already float_type = np.promote_types(data.dtype, np.float32) data = data.astype(float_type, copy=False) # normalize value range to avoid misfitting due to numeric errors if # the relative distances are small compared to absolute distances origin = data.mean(axis=0) data = data - origin scale = data.std() if scale < np.finfo(float_type).tiny: return _warn_or_msg( "Standard deviation of data is too small to estimate " "ellipse with meaningful precision.", warn_only=warn_only, ) data /= scale x = data[:, 0] y = data[:, 1] # Quadratic part of design matrix [eqn. 15] from [1] D1 = np.vstack([x**2, x * y, y**2]).T # Linear part of design matrix [eqn. 16] from [1] D2 = np.vstack([x, y, np.ones_like(x)]).T # forming scatter matrix [eqn. 17] from [1] S1 = D1.T @ D1 S2 = D1.T @ D2 S3 = D2.T @ D2 # Constraint matrix [eqn. 18] C1 = np.array([[0.0, 0.0, 2.0], [0.0, -1.0, 0.0], [2.0, 0.0, 0.0]]) try: # Reduced scatter matrix [eqn. 29] M = inv(C1) @ (S1 - S2 @ inv(S3) @ S2.T) except np.linalg.LinAlgError: # LinAlgError: Singular matrix return 'Singular matrix from estimation' # M*|a b c >=l|a b c >. Find eigenvalues and eigenvectors # from this equation [eqn. 28] eig_vals, eig_vecs = np.linalg.eig(M) # eigenvector must meet constraint 4ac - b^2 to be valid. cond = 4 * np.multiply(eig_vecs[0, :], eig_vecs[2, :]) - np.power( eig_vecs[1, :], 2 ) a1 = eig_vecs[:, (cond > 0)] # seeks for empty matrix if 0 in a1.shape or len(a1.ravel()) != 3: return 'Eigenvector constraints not met' a, b, c = a1.ravel() # |d f g> = -S3^(-1)*S2^(T)*|a b c> [eqn. 24] a2 = -inv(S3) @ S2.T @ a1 d, f, g = a2.ravel() # eigenvectors are the coefficients of an ellipse in general form # a*x^2 + 2*b*x*y + c*y^2 + 2*d*x + 2*f*y + g = 0 (eqn. 15) from [2] b /= 2.0 d /= 2.0 f /= 2.0 # finding center of ellipse [eqn.19 and 20] from [2] x0 = (c * d - b * f) / (b**2.0 - a * c) y0 = (a * f - b * d) / (b**2.0 - a * c) # Find the semi-axes lengths [eqn. 21 and 22] from [2] numerator = a * f**2 + c * d**2 + g * b**2 - 2 * b * d * f - a * c * g term = np.sqrt((a - c) ** 2 + 4 * b**2) denominator1 = (b**2 - a * c) * (term - (a + c)) denominator2 = (b**2 - a * c) * (-term - (a + c)) width = np.sqrt(2 * numerator / denominator1) height = np.sqrt(2 * numerator / denominator2) # angle of counterclockwise rotation of major-axis of ellipse # to x-axis [eqn. 23] from [2]. phi = 0.5 * np.arctan((2.0 * b) / (a - c)) if a > c: phi += 0.5 * np.pi # stabilize parameters: # sometimes small fluctuations in data can cause # height and width to swap if width < height: width, height = height, width phi += np.pi / 2 > phi %= np.pi E TypeError: unsupported operand type(s) for %=: 'numpy.complex128' and 'float' test-env/lib/python3.14/site-packages/skimage/measure/fit.py:952: TypeError =========================== short test summary info ============================ SKIPPED [1] tests/skimage/io/test_imread.py:17: could not import 'imread': No module named 'imread' SKIPPED [1] tests/skimage/io/test_simpleitk.py:8: could not import 'SimpleITK': No module named 'SimpleITK' SKIPPED [1] tests/skimage/util/test_lookfor.py:6: could not import 'SimpleITK': No module named 'SimpleITK' SKIPPED [1] tests/skimage/_shared/test_utils.py:253: requires numpydoc SKIPPED [1] tests/skimage/_shared/test_utils.py:284: requires numpydoc FAILED tests/skimage/measure/test_fit.py::test_circle_model_estimate - AssertionError: Warning with wrong stacklevel: Expected: /build/python-scikit-image/src/scikit-image-0.26.0/tests/skimage/measure/test_fit.py:219 Actual: /build/python-scikit-image/src/scikit-image-0.26.0/test-env/lib/python3.14/site-packages/skimage/measure/fit.py:624 DeprecationWarning: `minkowski_distance` is deprecated in favor of `scipy.spatial.distance.minkowski` as of SciPy 1.18.0 and will be removed in SciPy 1.20.0. FAILED tests/skimage/measure/test_fit.py::test_circle_model_int_overflow - AssertionError: Warning with wrong stacklevel: Expected: /build/python-scikit-image/src/scikit-image-0.26.0/tests/skimage/measure/test_fit.py:238 Actual: /build/python-scikit-image/src/scikit-image-0.26.0/test-env/lib/python3.14/site-packages/skimage/measure/fit.py:624 DeprecationWarning: `minkowski_distance` is deprecated in favor of `scipy.spatial.distance.minkowski` as of SciPy 1.18.0 and will be removed in SciPy 1.20.0. FAILED tests/skimage/measure/test_fit.py::test_circle_model_estimate_from_small_scale_data - AssertionError: Warning with wrong stacklevel: Expected: /build/python-scikit-image/src/scikit-image-0.26.0/tests/skimage/measure/test_fit.py:324 Actual: /build/python-scikit-image/src/scikit-image-0.26.0/test-env/lib/python3.14/site-packages/skimage/measure/fit.py:624 DeprecationWarning: `minkowski_distance` is deprecated in favor of `scipy.spatial.distance.minkowski` as of SciPy 1.18.0 and will be removed in SciPy 1.20.0. FAILED tests/skimage/measure/test_fit.py::test_ellipse_model_estimate[0] - TypeError: unsupported operand type(s) for %=: 'numpy.complex128' and 'float' FAILED tests/skimage/measure/test_fit.py::test_ellipse_model_estimate[15] - TypeError: unsupported operand type(s) for %=: 'numpy.complex128' and 'float' !!!!!!!!!!!!!!!!!!!!!!!!!! stopping after 5 failures !!!!!!!!!!!!!!!!!!!!!!!!!!! Results (976.39s): 5 failed 6087 passed 5 skipped 184 deselected ==> ERROR:(B A failure occurred in check().(B  Aborting...(B ]3008;end=82d6e5aa95c549579df299fd88fcbe55\[!p]104\[?7h]3008;end=7a450cc381b24099b4b3eebb01bd061f\==> ERROR:(B Build failed, check /var/lib/archbuild/extra-riscv64/felix-4/build(B [?12l[?25h[?12l[?25h]3008;end=ba70ec6bca874a72a806f5658126d770\[?12l[?25hreceiving incremental file list python-scikit-image-0.26.0-2-riscv64-build.log python-scikit-image-0.26.0-2-riscv64-check.log sent 62 bytes received 38,921 bytes 77,966.00 bytes/sec total size is 809,298 speedup is 20.76